Insertion junction: CLIP2.075428_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.075428
Chromosome:chromosome 5
Location:460021
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g243950 (1 of 83) IPR029044 - Nucleotide-diphospho-sugar transferases 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTTGTGTCTCCACATAGGGTTTGGCATCTTGTCGGGTTGCTGTGCTCGA
Internal bar code:GATTGATTCCAGATCAGTGGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1456
LEAP-Seq percent confirming:92.8571
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:GACTGGTAAGGGCGCTAGTC
Suggested primer 2:TGCATGACCGGCCATTTACT