Insertion junction: CLIP2.075431_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.075431
Chromosome:chromosome 13
Location:1918215
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g575950 HIRA1,HIR1 (1 of 1) K11293 - protein HIRA/HIR1 (HIRA, HIR1); Histone transcription regulator 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGTCTCACGAAGAATCAACTTAATCAAGATTGTAGGTGCAGGCCCTACA
Internal bar code:CTGTAAAGTGGTCCGTTATGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:895
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:GTGCTGTTTGGTGCTGGAAG
Suggested primer 2:CAGGTACCATGGGCGGATAC