Insertion junction: CLIP2.075439_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.075439
Chromosome:chromosome 14
Location:3413855
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre14.g630050 (1 of 6) PTHR13339//PTHR13339:SF0 - COP9 SIGNALOSOME COMPLEX SUBUNIT 8 // COP9 SIGNALOSOME COMPLEX SUBUNIT 8 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGTGCCCGGTCTGCCAGACCAGGCGCAAGAAGTCAGGAGGCAAGTGGCT
Internal bar code:ATCATTCCTTGGCAGTCTGTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:2762
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:TGTCAACGGCATGCATACCT
Suggested primer 2:AACTGCTGCTGCCACCTTAT