Insertion junction: CLIP2.075441_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.075441
Chromosome:chromosome 17
Location:301135
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g697950 AAA3 Plastidic ADP/ATP translocase; (1 of 2) PTHR31187:SF1 - ADP,ATP CARRIER PROTEIN 1, CHLOROPLASTIC-RELATED outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTTGGAAGCAGTGCGGATGCGCCAGCGGTTGCGTGTCTGCGCCAGCGAT
Internal bar code:AAGTGCTGGACTAGTAACGGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:4503
LEAP-Seq percent confirming:97.0588
LEAP-Seq n confirming:66
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:68

Suggested primers for confirmation by PCR

Suggested primer 1:GAGGGTTTGCAGCAAAGTCG
Suggested primer 2:GGAAAGGAACAACGGCAACC