Insertion junction: CLIP2.075451_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.075451
Chromosome:chromosome 3
Location:5022243
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre03.g179860 (1 of 1) 2.1.1.203 - tRNA (cytosine(34)-C(5))-methyltransferase; tRNA-(m5C) methyltransferase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCTGAGCTGCGTCAGCGTCGCCACCCTCGGCGCCCTCGCCGTCCTCCGC
Internal bar code:CGCGTCGTTTACGCTAACACGG

Confirmation - LEAP-Seq

LEAP-Seq distance:723
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:ACAGGACACGGCGTTTGTAT
Suggested primer 2:CAGAGGCGCAGAAGAAGACA