Insertion junction: CLIP2.075451_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.075451
Chromosome:chromosome 5
Location:226720
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g243050 TRX3,TRXf2,TRXF2 (1 of 1) PTHR10438:SF258 - THIOREDOXIN F1, CHLOROPLASTIC-RELATED; Thioredoxin f2, chloroplastic outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTGATGTGCTACGACGGGAAGTAAACGACGCAGTGAATACAGTTATGAT
Internal bar code:AAGAACCTGTTGAGTCCAGCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2482
LEAP-Seq percent confirming:81.8182
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:CGAGTGAAGACGCACCCATA
Suggested primer 2:CCTCACATTGCACCCTCCAT