Insertion junction: CLIP2.075459_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.075459
Chromosome:chromosome 13
Location:3220561
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g585450 (1 of 781) IPR000104 - Antifreeze protein, type I 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTGCTGTCTGTTCCCGACCTTTTTGTCACTATGACGAAACCGCGATGAA
Internal bar code:TTTTGAAACTCGCGTAGCAAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1633
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:CGAAACATGCCAGGGGTACT
Suggested primer 2:CGGATACCGTCATGTCTGGG