Insertion junction: CLIP2.075466_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.075466
Chromosome:chromosome 12
Location:4842407
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g523550 UMM11 UbiE/COQ5 methyltransferase family protein; (1 of 1) PTHR10108//PTHR10108:SF752 - METHYLTRANSFERASE // SUBFAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACTCCACACCACACACAAACACGGCCTGACGGCCACACGTGACCATTAG
Internal bar code:TTGATGCACTGCTGGCGCAGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:3196
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:84
LEAP-Seq n nonconfirming:21
LEAP-Seq n unique pos:105

Suggested primers for confirmation by PCR

Suggested primer 1:CCGATCTCCCGTACACGATG
Suggested primer 2:CGGACTGATAGCCCCGTTAC