Insertion junction: CLIP2.075471_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.075471
Chromosome:plastome
Location:74884
Confidence (%):63
Locus systematic id Locus common name Defline Feature
intergenic

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGGCCTCTAGACGATGGGGGCTTTTTGTTATATTTTACTAAATATATAT
Internal bar code:ATTATCGCCGAGGCGTGGGGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:60
LEAP-Seq percent confirming:4.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:24
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:CGGAGCATTGACATCCCCAT
Suggested primer 2:TTGAAGTAAGCCGTGGCACT