Insertion junction: CLIP2.075491_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.075491
Chromosome:plastome
Location:1680
Confidence (%):63
Locus systematic id Locus common name Defline Feature
CreCp.g802263 ChreCp001,2716989,petA (1 of 1) K02634 - apocytochrome f (petA); apocytochrome f precursor CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGCTAAAACTTGTTTAACTTGTTTATCGTATGGAAGTTCAATAACAGCT
Internal bar code:CCGATCCATCAGTGAAGTAGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:135
LEAP-Seq percent confirming:71.4286
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:TTGCACTTTCCTCGTACCCG
Suggested primer 2:TTTCAGCCTGACCGAAACCA