Insertion junction: CLIP2.075493_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.075493
Chromosome:chromosome 1
Location:249023
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g001600 Predicted protein containing BTB/POZ fold domain (involved in protein binding); (1 of 25) IPR000210//IPR011333 - BTB/POZ domain // POZ domain 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGACTATGTTAGCGACGTGCACACGAATATGCAAGCATGCTCCGACACTT
Internal bar code:AGCCAGGGGCAAAGAGGTCGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:2626
LEAP-Seq percent confirming:80.9524
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:CTATGCCGTGTCAAATGCCG
Suggested primer 2:GCTCCATGAGTCCCAGATGG