Insertion junction: CLIP2.075504_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.075504
Chromosome:chromosome 12
Location:7738417
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre12.g554650 REC8 cohesin complex subunit, putative meiotic isoform; (1 of 3) PF04824 - Conserved region of Rad21 / Rec8 like protein (Rad21_Rec8) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACACGCGCGCCTCACCTGGCCCGATCCTTGCCCTTCTGCAGCACGGTGT
Internal bar code:ACGGAAGTATCGGGTCATCTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:684
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:GGTGGTCGTGTTCAACAAGC
Suggested primer 2:TGGCAATCCCCTCCCATCTA