Insertion junction: CLIP2.075508_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.075508
Chromosome:chromosome 5
Location:1497084
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g234654 (1 of 1) IPR002110//IPR003613//IPR013083//IPR020683 - Ankyrin repeat // U box domain // Zinc finger, RING/FYVE/PHD-type // Ankyrin repeat-containing domain 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCAAAATTTCTGCAGCTACTCGCTGCAGCTTGGCGTCAGCATTGGACAG
Internal bar code:AGAAAGGCCAACCCTGGAATGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1320
LEAP-Seq percent confirming:34.4
LEAP-Seq n confirming:43
LEAP-Seq n nonconfirming:82
LEAP-Seq n unique pos:125

Suggested primers for confirmation by PCR

Suggested primer 1:GTTAGCGACGGCGGAATTTC
Suggested primer 2:TCCGGGACCCTACTGTACTG