Insertion junction: CLIP2.075511_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.075511
Chromosome:chromosome 6
Location:7300031
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g299250 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGAAAAGATTTACGTAGGTCTAGATAGGCGGCTGCAGGACAGCAGGGAT
Internal bar code:GATGAGATTGACGTAACGTCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2821
LEAP-Seq percent confirming:94.6429
LEAP-Seq n confirming:106
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:112

Suggested primers for confirmation by PCR

Suggested primer 1:GTCCTACCTGCACCTTCCAC
Suggested primer 2:CAGGGCGTCTGAATTGCATG