Insertion junction: CLIP2.075521_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.075521
Chromosome:chromosome 17
Location:1877506
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g709600 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGCGGTGCTTGCCTCTCTCCCGAGCCAACCGTCTGCGCCTTTCCGAATT
Internal bar code:AGTTTACACATTTCGCCCGTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:3391
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:58
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:58

Suggested primers for confirmation by PCR

Suggested primer 1:TGTACCACTTCCTTCGGCAC
Suggested primer 2:GCATTGGGCACTTGCGATAG