Insertion junction: CLIP2.075522_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.075522
Chromosome:chromosome 5
Location:2717979
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g240350 3'UTR
Cre05.g240400 SOM2 (1 of 2) PTHR11746//PTHR11746:SF104 - O-METHYLTRANSFERASE // O-METHYLTRANSFERASE 10; S-adenosyl-L-methionine-dependent O-methyltransferase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGGTGTATTTCATGACATTCGTCAAGGATCACGTAGTCTGCATGAATGT
Internal bar code:GAAGTTGTAGCATACGGAGTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:944
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:GACAACGTCACCGACTTCCT
Suggested primer 2:CACACACAGGAGTTTTGCGG