Insertion junction: CLIP2.075531_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.075531
Chromosome:chromosome 16
Location:1303427
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g651450 (1 of 3) PTHR13367:SF8 - OTU DOMAIN-CONTAINING PROTEIN 7B 3'UTR
Cre16.g651500 (1 of 1) K12180 - COP9 signalosome complex subunit 7 (COPS7, CSN7) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCGGCTGATCGGGTACTGAGTCAATTGACAGGATTGCCCCCCCCCCTCC
Internal bar code:CTGGCGCTAGATTCAGTACCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1223
LEAP-Seq percent confirming:96.875
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:TTGTTGCCGTGAATGCTGTG
Suggested primer 2:CAGGTGTGTGACGTTGCTTG