Insertion junction: CLIP2.075539_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.075539
Chromosome:chromosome 7
Location:5647763
Confidence (%):80
Locus systematic id Locus common name Defline Feature
intergenic

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCACACACATCGGGACTACGCTTTCCTGCCCCTTGCCATGTTCCATCACG
Internal bar code:GTGGATTGTACAGTAAGATGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1340
LEAP-Seq percent confirming:89.4737
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:GTTTGCGGACATTCTCGAGC
Suggested primer 2:TTGCTTCGCCTTGTTCTTGC