Insertion junction: CLIP2.075539_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.075539
Chromosome:chromosome 9
Location:3942973
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g398252 (1 of 13) 1.1.1.300 - NADP-retinol dehydrogenase / Retinol dehydrogenase (NADP(+)) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGAGGGAGAGGCCTGAGGGAAGTGAGGGAGCGGCAGTGAGGGAGAGGCG
Internal bar code:TAATGCCTTTGCAGCTGGATAG

Confirmation - LEAP-Seq

LEAP-Seq distance:927
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:TCGTGCTCCACTTGACCATC
Suggested primer 2:CACCTCTCTCTACCTGGCCT