Insertion junction: CLIP2.075547_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.075547
Chromosome:chromosome 1
Location:6628096
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre01.g047218 (1 of 8) PF10184 - Uncharacterized conserved protein (DUF2358) (DUF2358) 3'UTR
Cre01.g047229 (1 of 1) PTHR14894:SF0 - CDK5 REGULATORY SUBUNIT-ASSOCIATED PROTEIN 3 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTCTGTAAAAAGGCTGGAACCCTTGCCCGCACCCACCAGCCATTCCGTT
Internal bar code:TGGCGGATAGCCACTGCAGGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:516
LEAP-Seq percent confirming:94.4444
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:TTGGCGCCATTTCCCTTACT
Suggested primer 2:GCAGCAACGTTGTGATGTGT