Insertion junction: CLIP2.075548_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.075548
Chromosome:chromosome 3
Location:1436878
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g151050 (1 of 2) IPR000210//IPR008974//IPR011333 - BTB/POZ domain // TRAF-like // POZ domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTGGCTGCATGTTGTGTAGAGATAAGCGCATGCGCTCACTGGCTGCTGC
Internal bar code:ACGTAGTCTGCCGGCGGAATGG

Confirmation - LEAP-Seq

LEAP-Seq distance:467
LEAP-Seq percent confirming:28.5714
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:TACAGTGCTTTGCGTTTGGC
Suggested primer 2:CGGTAGCAGTAGCATCAGCA