Insertion junction: CLIP2.075549_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.075549
Chromosome:chromosome 16
Location:129402
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre16.g695300 (1 of 1) K12878 - THO complex subunit 1 (THOC1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGATTTAATCACAGGAGCGACGGAGGAGTTTACGGCGCTGTGCCCACGC
Internal bar code:TGATGTCATCGGACTTGACGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:232
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:AGACTAACAAGCGGGTTGGG
Suggested primer 2:AGCTCCAGCACCATTTCCTC