Insertion junction: CLIP2.075556_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.075556
Chromosome:chromosome 2
Location:2353995
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g090750 (1 of 1) PF08574 - Protein of unknown function (DUF1762) (DUF1762) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAAGGAAGTGCGGACCAAGGCATTCACACTCCCACGGAAACCTCGAGAA
Internal bar code:CGAATTTAATAGATATTCATCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1817
LEAP-Seq percent confirming:96.7742
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGGGAGGACGAGGATGAT
Suggested primer 2:GTGCAACTCGACCAGACTCA