Insertion junction: CLIP2.075557_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.075557
Chromosome:chromosome 10
Location:5503379
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g457950 (1 of 781) IPR000104 - Antifreeze protein, type I 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGACCACTGTTTGATTTGCACCACTGTTTATAGGTACTGCCACAAACA
Internal bar code:GCCAATCATGGCTGGGATTGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1537
LEAP-Seq percent confirming:90.625
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:GCGGATCAAACGTCGCAATT
Suggested primer 2:ATGTTCGAGCTGCACACTGA