Insertion junction: CLIP2.075562_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.075562
Chromosome:chromosome 15
Location:577928
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre15.g636450 SMM58 S-adenosyl-L-methionine-dependent methyltransferase; (1 of 1) K15190 - 7SK snRNA methylphosphate capping enzyme [EC:2.1.1.-] (MEPCE, BCDIN3) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTGTTTCGGCCGTCATGCGAGCTGCGTCTTGACTTAGCTTACTTGCGCT
Internal bar code:TTCAACGGGTTATTGGACATCG

Confirmation - LEAP-Seq

LEAP-Seq distance:200
LEAP-Seq percent confirming:12.5
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:TGCAATTGGAACGCTGTGTG
Suggested primer 2:ATCCATCTCTTGGCAGGCAC