Insertion junction: CLIP2.075579_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.075579
Chromosome:chromosome 13
Location:4191458
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g591501 PUS2 (1 of 2) PTHR11142:SF0 - TRNA PSEUDOURIDINE SYNTHASE-LIKE 1; RNA pseudouridine synthase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAAACTTAAAATGTGGATATATGTGAAATAGCGTACGTATCTCGAGCTAG
Internal bar code:TCTCTATCCCGTGGTTATTTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:472
LEAP-Seq percent confirming:85.0
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:GCTGTGTCGCCAAACCAATT
Suggested primer 2:AGGACTTGCATGCTGGGTAC