Insertion junction: CLIP2.075580_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.075580
Chromosome:chromosome 17
Location:796052
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g701500 DNJ1 (1 of 1) K09503 - DnaJ homolog subfamily A member 2 (DNAJA2); DnaJ-like protein 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAATCGTAAAGTATAACAATGTTTGGAGGGTTCCCGTTCGGCGGGATGGG
Internal bar code:AAATGCTACATCGCTTTAGCCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1848
LEAP-Seq percent confirming:97.2973
LEAP-Seq n confirming:36
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:CGTAGGCCTCGTTGATCTCC
Suggested primer 2:TAATAGTCGCTGGCTCGCTG