Insertion junction: CLIP2.075583_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.075583
Chromosome:chromosome 14
Location:3990457
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g633150 OPR66 OctotricoPeptide Repeat protein, probably a pseudogene 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTTGGCCTAGCCCTGTCGCCGGCGCAGTCTCTGCTACCTCATCGCTCAT
Internal bar code:TGCGGTGAGATGGTGACTTCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:58
LEAP-Seq percent confirming:23.5294
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:CAAAAAGTCACGCGCTCACA
Suggested primer 2:TTCAATGCAAGTGCTGGTGC