Insertion junction: CLIP2.075583_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.075583
Chromosome:chromosome 14
Location:3990457
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g633150 OPR66 OctotricoPeptide Repeat protein, probably a pseudogene 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACAAGGCGTCCGACACGCCGCGCAACACCACCACAAGGCCTTCCGCCGA
Internal bar code:TAAGACGGACGCGCCTGAACT

Confirmation - LEAP-Seq

LEAP-Seq distance:2418
LEAP-Seq percent confirming:96.5517
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:TTCAATGCAAGTGCTGGTGC
Suggested primer 2:CAAAAAGTCACGCGCTCACA