Insertion junction: CLIP2.075585_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.075585
Chromosome:chromosome 13
Location:2132342
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g577500 VTI1 (1 of 1) K08493 - vesicle transport through interaction with t-SNAREs 1 (VTI1); Endosomal Qb-SNARE, Vti1-family (Qb.III.b) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCACTGCATTGCTGCCTCAGCAATGGTACCAACCCTGTCCCATCGCACG
Internal bar code:GCCGTGTTTTCTTGATCGACGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2316
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:104
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:104

Suggested primers for confirmation by PCR

Suggested primer 1:GGGGACTTGAGATATGGCCG
Suggested primer 2:TGCTGGTCAATAGCCATGCA