Insertion junction: CLIP2.075587_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.075587
Chromosome:chromosome 2
Location:4520080
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g106850 TPR6 (1 of 1) PTHR22904:SF289 - CARBOXYLATE CLAMP-TETRATRICOPEPTIDE REPEAT PROTEIN-RELATED; Tetratricopeptide-repeat protein 6 3'UTR
Cre02.g106900 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGCACGCGGCTCTCCGGCCGCGCAAGTTTAGTACGCGGTTGTGTCCGAC
Internal bar code:TGTTGGTGAGCTTCTCACGCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:789
LEAP-Seq percent confirming:36.8421
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:TTTGCAGGAAACCCACACCT
Suggested primer 2:GGCGGTCTGTTGTTGTGAAC