Insertion junction: CLIP2.075591_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.075591
Chromosome:chromosome 12
Location:2730412
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre12.g504550 HTB15 (1 of 27) K11252 - histone H2B (H2B); Histone H2B CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTTGGGCTCCTTGGCAGCCTTCTTGGAGGGCTCCTTGGCCTTCTTGGCG
Internal bar code:GACCCACCCCGAACTGTCGGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:2630
LEAP-Seq percent confirming:33.0097
LEAP-Seq n confirming:34
LEAP-Seq n nonconfirming:69
LEAP-Seq n unique pos:103

Suggested primers for confirmation by PCR

Suggested primer 1:TTGCCCTTCTTCAGGTAGCG
Suggested primer 2:GCTGCTTTCCACGCTTTCAA