Insertion junction: CLIP2.075596_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.075596
Chromosome:chromosome 6
Location:6346040
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g293100 (1 of 2) PTHR19957:SF124 - SYNTAXIN-8B-RELATED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGAAGAGCCCTGCATGGGCCCAATGCTAGGACATTGAACTCGTGTTTAA
Internal bar code:CGCTTATGTTCGAATGCTTAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2065
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:98
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:98

Suggested primers for confirmation by PCR

Suggested primer 1:GCAGATGCAGTGTGTACCCT
Suggested primer 2:GCCTGCCTTTCTTACCCACT