Insertion junction: CLIP2.075596_4

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.075596
Chromosome:chromosome 12
Location:1272051
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g489650 (1 of 6) IPR002557 - Chitin binding domain 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCGGGTGTCAGTGGAGCCGAATCCCGGCACCACGCGCAACACCCCGAGC
Internal bar code:TTGCTTCGTTAGAGGGACATGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1148
LEAP-Seq percent confirming:97.7778
LEAP-Seq n confirming:44
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:CGGGACCCTAGTGATGATGC
Suggested primer 2:GAGCTGCTCTTATGCGCAAC