Insertion junction: CLIP2.075605_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.075605
Chromosome:chromosome 11
Location:4202865
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre11.g481600 GAS28 Hydroxyproline-rich glycoprotein, stress-induced; (1 of 71) PF12499 - Pherophorin (DUF3707) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCACTGACCCCCTCGCCCTCGCCCCATCCCGTTTTCCTTGCCCTGCGCAG
Internal bar code:TCTGATTCATTGGCAGACCCCG

Confirmation - LEAP-Seq

LEAP-Seq distance:322
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:GATTACTGGGTAGGGACGCG
Suggested primer 2:CGCCCCCAACTACTTTCCAT