Insertion junction: CLIP2.075614_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.075614
Chromosome:chromosome 13
Location:3410881
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g586800 (1 of 8) IPR001810//IPR006553 - F-box domain // Leucine-rich repeat, cysteine-containing subtype 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTCCCGAACTCATCACGCAATCGCTAATCCTTTCGACATCAAGGATTGA
Internal bar code:ATTACGTGATGCCATTATGTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:4490
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:TTCTATTGACAGCCCGCGTT
Suggested primer 2:ACTCCAGGTCGTTGCTGAAG