Insertion junction: CLIP2.075615_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.075615
Chromosome:chromosome 3
Location:5973583
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g189250 RAB11,RABA1 Small Rab-related GTPase; (1 of 1) K07904 - Ras-related protein Rab-11A (RAB11A) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTAGCTACTACTGCGCCCCTGCAAACTTAGCTAGCAGATATCTTCACTC
Internal bar code:GATTGCTTCGGCCTGTGACCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:3799
LEAP-Seq percent confirming:98.0769
LEAP-Seq n confirming:51
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:52

Suggested primers for confirmation by PCR

Suggested primer 1:TGCAGTGTCCCAAATTTGCG
Suggested primer 2:AGGAGGTGCACGAACGATTT