Insertion junction: CLIP2.075616_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.075616
Chromosome:chromosome 8
Location:2217614
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g370200 (1 of 5) IPR001214//IPR003616 - SET domain // Post-SET domain outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGAGTTGAATGCTGAGTTTGTAACAGTTCCACCTACCGGATGTCCAGCAC
Internal bar code:TAGCGAACCAGACGTATACGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:601
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:GCACGTAGGTGTGTGTGAGA
Suggested primer 2:ATCAACCACTCGTGTGACCC