Insertion junction: CLIP2.075619_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.075619
Chromosome:chromosome 17
Location:5599587
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g739752 FTSHi1,CTAP1,FTSHI1 (1 of 3) IPR000642//IPR003593//IPR003959//IPR027417 - Peptidase M41 // AAA+ ATPase domain // ATPase, AAA-type, core // P-loop containing nucleoside triphosphate hydrolase; Chloroplast-import FtsH-like ATPase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTTGGCTGGCAGTGGGATGCTGCGGGATGCCTACCTGGGCAAGAGGATG
Internal bar code:ATATGATAATCATAATACGTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:627
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CGCCCAAATGAGCTTCATCG
Suggested primer 2:TGAGGGACATCTTTGACGCC