Insertion junction: CLIP2.075625_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.075625
Chromosome:chromosome 9
Location:5213702
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g406950 (1 of 5) IPR000104//IPR016024 - Antifreeze protein, type I // Armadillo-type fold 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTGTGTGGGTATGTGTGGCACATGCTGGTGTGCGTGACGGTCCTGGCTT
Internal bar code:GTGGTTGGACAATTAAGGCACT

Confirmation - LEAP-Seq

LEAP-Seq distance:1232
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:GTGGTGGTCGTGGATGGATT
Suggested primer 2:TGAAAGGCCTCGTGGAGAAC