Insertion junction: CLIP2.075627_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.075627
Chromosome:chromosome 6
Location:7046193
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre06.g297500 (1 of 781) IPR000104 - Antifreeze protein, type I 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACCTGAGCCAGTGCCCGGGTTGGTATCGCGGACAGGCCGTACTACTGGG
Internal bar code:ATAAATATTGAATGGAAACACG

Confirmation - LEAP-Seq

LEAP-Seq distance:1133
LEAP-Seq percent confirming:30.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:GTACCCTTTGCCTGAGTGCT
Suggested primer 2:CTCCGCTTCCTTGAACCCTT