Insertion junction: CLIP2.075631_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.075631
Chromosome:chromosome 9
Location:2638590
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g392050 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTTTCTGTACAATAGAAAAAATAGGCCGCAGGGAAAATTCGGGCGGAGC
Internal bar code:TCGTCTATTCCCGGCTTGTGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1913
LEAP-Seq percent confirming:44.7761
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:37
LEAP-Seq n unique pos:67

Suggested primers for confirmation by PCR

Suggested primer 1:TTTGCCCATCGCCATGTACT
Suggested primer 2:TTAAAGGCAACGGGGGACTC