Insertion junction: CLIP2.075632_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.075632
Chromosome:chromosome 3
Location:170952
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre03.g800281 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGTTTTCACAAGTCGCCTATGCGGTTTTAGCTTGTGCTTGCAGTGTATC
Internal bar code:GCAAACCAATATTTGACTGTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:461
LEAP-Seq percent confirming:40.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:CCCATCCGCTGCTCACATAT
Suggested primer 2:CTGATCTATGGTCGCCGGTC