Insertion junction: CLIP2.075635_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.075635
Chromosome:chromosome 8
Location:3086721
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g800939 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTCAGACGATTCGGGTGGCGGGGCCGCCGCGGCTGCCTTCGTGCCAGCG
Internal bar code:AATCAAGCTTTAGCATCAGTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:3499
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:CGCGTGGACAAAGATTGTGG
Suggested primer 2:AGCCGCATCCCAACACATTA