Insertion junction: CLIP2.075647_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.075647
Chromosome:chromosome 12
Location:4055072
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g516400 SPL24 Pre-mRNA splicing factor; (1 of 1) PF04146 - YT521-B-like domain (YTH) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTCCGCCTCTACGTCCTGCAACTTCCAATACGTGTAGTCCCTTCCGGCA
Internal bar code:CAAATAGTTTTTCGTATTATAT

Confirmation - LEAP-Seq

LEAP-Seq distance:837
LEAP-Seq percent confirming:60.9756
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:GGAAGAGTAAGTCGGCGAGG
Suggested primer 2:TACCTGCTAAGCCCCCAGAT