Insertion junction: CLIP2.075648_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.075648
Chromosome:chromosome 1
Location:1788662
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g009950 NEP1 NEP1-like protein; (1 of 1) 2.1.1.257 - tRNA (pseudouridine(54)-N(1))-methyltransferase / M(1)-Psi methyltransferase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGCGGGTACAGGCAGGTAATTATCCGCTTCGGGCCCCATGTGTACTGA
Internal bar code:GAGAGGCAAGCGACATACTTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3099
LEAP-Seq percent confirming:98.5507
LEAP-Seq n confirming:68
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:69

Suggested primers for confirmation by PCR

Suggested primer 1:TTCCCTGACGCTGTGACTTC
Suggested primer 2:AGAATAACGCCGCTCGAGAG