Insertion junction: CLIP2.075651_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.075651
Chromosome:chromosome 12
Location:8883605
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre12.g546050 DXR,DXR1 (1 of 1) 1.1.1.267 - 1-deoxy-D-xylulose-5-phosphate reductoisomerase / DXP-reductoisomerase; 1-deoxy-D-xylulose 5-phosphate reductoisomerase, chloroplast precursor intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGGTAGGGTGGAGATGGGGTGGGGGTGGCAGCGGGGGTGTGGCAGAGGG
Internal bar code:CCTGCTCATTTACAGCGTACCA

Confirmation - LEAP-Seq

LEAP-Seq distance:368
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGTGTGGGGTGTGTTTGA
Suggested primer 2:CCAACAAATCACGCACAGCA