Insertion junction: CLIP2.075659_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.075659
Chromosome:chromosome 10
Location:4147335
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g448800 (1 of 1) PF09186 - Domain of unknown function (DUF1949) (DUF1949) 3'UTR
Cre10.g448850 FAP135,ODA5AK,CAL5 (1 of 3) 3.4.22.54 - Calpain-3 / Muscle-specific calcium-activated neutral protease 3; Calpain-Like Flagellar Associated Protein 135 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTACAGCAAAATTCCAAACGCCTGCATCCATGTTGCCAGCCGCGTGCCGA
Internal bar code:TGGTTAGTATTATTACTCAGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:3144
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:85
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:85

Suggested primers for confirmation by PCR

Suggested primer 1:CCACACAGACAGAGGCATGT
Suggested primer 2:CATGCTCGCCTCGATAGTGT