Insertion junction: CLIP2.075665_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.075665
Chromosome:chromosome 8
Location:1561576
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre08.g365351 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGCGCTTGTGAGCCTGCAGCTGGCGACCTCCAAGCTCAGGCTGAGCCAG
Internal bar code:GACTTATGGCGATATTTTTCCC

Confirmation - LEAP-Seq

LEAP-Seq distance:603
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:CAGCCTTCTTGGTCCTCAGG
Suggested primer 2:GGTAGTCAAGCGGGTTCCTC