Insertion junction: CLIP2.075669_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.075669
Chromosome:chromosome 17
Location:6646048
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g745747 (1 of 3) PTHR12136//PTHR12136:SF47 - STEROIDOGENIC ACUTE REGULATORY PROTEIN STAR // STEROIDOGENIC ACUTE REGULATORY-LIKE PROTEIN 1 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGCAAGGGCTCGTACACGATGCAATGTTCAGTGGGAACAGTTGCCTTGT
Internal bar code:TTGCTATGTCGGGGGCAGGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3154
LEAP-Seq percent confirming:91.0714
LEAP-Seq n confirming:51
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:56

Suggested primers for confirmation by PCR

Suggested primer 1:ACGAGCATGTGCATCCGTAT
Suggested primer 2:ACAGATGAGGAGCGCAACAA